Student Publications - Journal Papers

Papers in international journals

  • Vlachos IS, Paraskevopoulou MD, Karagkouni D, Georgakilas G, Vergoulis T, Kanellos I, Anastasopoulos IL, Maniou S, Karathanou K, Kalfakakou D, Fevgas A, Dalamagas T, Hatzigeorgiou AG (2015) DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions. Nucleic Acids Res 43: D153-159.
  • Anuj Sharma, Elias S. Manolakos, "Efficient multi-criteria protein structure comparison on modern processor architectures", BioMed Research International Volume 2015 (2015), Article ID 563674, 13 pages http://dx.doi.org/10.1155/2015/563674
  • Ouzounoglou E, Kalamatianos D, Emmanouilidou E, Xilouri M, Stefanis L, Vekrellis K, Manolakos ES. In silico modeling of the effects of alpha-synuclein oligomerization on dopaminergic neuronal homeostasis. BMC Syst Biol 2014; 8: 54 http://www.biomedcentral.com/1752-0509/8/54
  • Paraskevopoulou MD1, Georgakilas G, Kostoulas N, Reczko M, Maragkakis M, Dalamagas TM, Hatzigeorgiou AG (2013) DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. Nucleic Acids Res 41: D239-45.
  • Vlachos IS, Kostoulas N, Vergoulis T, Georgakilas G, Reczko M, Maragkakis M, Paraskevopoulou MD, Prionidis K, Dalamagas T, Hatzigeorgiou AG (2012) DIANA miRPath v.2.0: Investigating the combinatorial effect of microRNAs in pathways. Nucleic Acids Research 40: W498-W504.
  • Vergoulis T, Vlachos IS, Alexiou P, Georgakilas G, Maragkakis M, Reczko M, Gerangelos S, Koziris N, Theodore D, Hatzigeorgiou AG (2012) TarBase 6.0: Capturing the exponential growth of miRNA targets with experimental support. Nucleic Acids Research 40: D222-D229.
  • Paraskevopoulou MD, Vlachos IS, Athanasiadis E, Spyrou G. "BiDaS: a web-based Monte Carlo BioData Simulator based on sequence/feature characteristics." Nucleic Acids Res. 2013 Jul;41(Web Server issue):W582-6
  • Minas V. Liarokapis, Panagiotis K. Artemiadis, Kostas J. Kyriakopoulos and Elias S. Manolakos, "A Learning Scheme for Reach to Grasp Movements: On EMG-Based Interfaces Using Task Specific Motion Decoding Models", IEEE Journal of Biomedical and Health Informatics (J-BHI), 2013.
  • Dimosthenis Tsagrasoulis, Vasilis Danos,, Maria Kissa, Philip Trimpalis, V. Lila Koumandou, Amalia D. Karagouni, Athanasios Tsakalidis and Sophia Kossida. SAFE Software and FED Database to Uncover Protein-Protein Interactions using Gene Fusion Analysis. Evolutionary Bioinformatics 2012:8 47-60
  • Ropodi, A., Sakkos, N., Moschopoulos, C., Magklaras, G., & Kossida, S. (2011). Superclusteroid: a Web tool dedicated to data processing of protein-protein interaction networks. EMBnet.Journal, 17(2), pp. 10-15.
  • Thanasis Vergoulis, Ioannis S. Vlachos, Panagiotis Alexiou, George Georgakilas, Manolis Maragkakis, Martin Reczko, Stefanos Gerangelos, Nectarios Koziris, Theodore Dalamagas, and Artemis G. Hatzigeorgiou. TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support Nucleic Acids Res. 2011 : gkr1161v1-gkr1161.


Papers in greek journals

  • V. Mamakou, B. Spyropoulos, A patient medical imaging referral support system based on medical-managerial & patient-safety criteria, e-jst, pp. 47-57, Vol. 9-4/2014, http://e-jst.teiath.gr/issue_37/Spyropoulos_37.pdf  
  • B. Spyropoulos, M. Kontogiorgis, K. Christou, G. Tzanoukos, S. Lalissidou, G. Leontidis, K. Rota, V. Tsimpida, Emerging Technologies in Clinical Laboratories as Outlined in Industrial Property Documents, pp. 31-46, Vol. 9-4/2014, http://e-jst.teiath.gr/issue_37/Spyropoulos_37.pdf
  • Georgios K. Leontidis, Retina vessel width estimation using bifurcation points to track vessels, e-Journal of science and technology issue 1, vol 9, 2014, pg.7-12
  • Georgios K. Leontidis, Monte carlo generation of benign and malignant masses inside mammograms. e-journal of science and technology issue 5, vol 8, 2013, pg.27-32


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